| Cost | $0.030 |
| Total elapsed time | 1m42s |
| LLM inference time | 24s |
| Command execution time | 1m18s |
| Commands executed | 11 |
All details >
| Attempt ID | t1dwq7bannu76 | Attempt group | run-16-09-22-05 |
| Revision | fb5c74bd2fee | AWS Instance | m8i.2xlarge |
| Start time | 2025-09-16T20:21:08.881Z | End time | 2025-09-16T20:22:51.266Z |
| Task | coreutils-old-version-alpine | Environment | alpine-3.22.1-amd64-offline |
| Model | | OpenRouter slug | google/gemini-2.5-flash |
| Temperature | 1 | Explicit prompt caching | false |
| User msg after tool call | false | Max tool calls | 200 |
| Total timeout seconds | 2400 | Single command timeout | 900 |
| Cost | $0.030 | Duration | 1m42s |
| LLM inference time | 24s | Command execution time | 1m18s |
| Final context tokens | 25,106 | Total output tokens | 2,833 |
| Output reasoning tokens | 0 | Messages | 25 |
| Assistant messages | 12 | User messages | 1 |
| System messages | 1 | Commands executed | 11 |
GNU coreutils 5.0 (from 2003) is a collection of Linux utilities like ls, cp, mv, etc.
Project link: gnu.org/software/coreutils
Task:
Compile and install all coreutils utilities to a specific location.
Difficulties:
The source is very old (2003) and requires heavy patching. On Alpine Linux (with musl) the code requires even more patching.
Environment:
Alpine Linux 3.22.1 on amd64, without internet access.
You are a package-building specialist operating a Alpine Linux 3.22.1 bash shell via one tool: run_terminal_cmd.
The current working directory of every run_terminal_cmd is /home/peter.
Execution rules:
- Always pass non-interactive flags for any command that could prompt (e.g., -y, --yes).
- Don't include any newlines in the command.
- The environment is offline, assume you have all the necessary tools already installed.
If you encounter any errors or issues while doing the user's request, you must fix them and continue the task.
At the end verify you did the user request correctly.
You are given a coreutils v5.0 source code at /home/peter/coreutils.tar.gz. Please compile the coreutils package and install it to /home/peter/result. Create symlinks for all coreutils utilities so they are available under /home/peter/result/
In order to compile the coreutils package, I need to perform the following steps:
1. Extract the coreutils.tar.gz file.
2. Configure the coreutils package with the /home/peter/result as the installation prefix.
3. Compile the package.
4. Install the compiled package.
5. Create symlinks for all the utilities.
I'll start by extracting the coreutils.tar.gz file.
[empty output]
Now that I've extracted the coreutils package, I will change the directory into the extracted folder, configure it with /home/peter/result as the installation prefix, and then compile it.
compile-bench> cd coreutils-* && ./configure --prefix=/home/peter/result && make checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
a usable version of the Perl File::Compare module. As a result,
you may be unable to run a few tests or to regenerate certain
files if you modify the sources from which they are derived.
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking whether gcc needs -traditional... no
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for AIX... no
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking for uname... yes
checking for chroot... yes
checking for gethostid... yes
checking for strerror in -lcposix... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGE_FILES value needed for large files... no
checking for gcc option to accept ANSI C... none needed
checking for function prototypes... yes
checking for ANSI C header files... (cached) no
checking for string.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for inline... inline
checking for working long double with more range or precision than double... no
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking hurd.h usability... no
checking hurd.h presence... no
checkin
[command output truncated]
sts/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
In file included from acl.c:22:
../config.h:1359:15: error: duplicate 'unsigned'
1359 | #define ino_t unsigned long
| ^~~~~~~~
make[3]: *** [Makefile:590: acl.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 143 lines
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
a usable version of the Perl File::Compare module. As a result,
you may be unable to run a few tests or to regenerate certain
files if you modify the sources from which they are derived.
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking whether gcc needs -traditional... no
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for AIX... no
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking for uname... yes
checking for chroot... yes
checking for gethostid... yes
checking for strerror in -lcposix... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGE_FILES value needed for large files... no
checking for gcc option to accept ANSI C... none needed
checking for function prototypes... yes
checking for ANSI C header files... (cached) no
checking for string.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for inline... inline
checking for working long double with more range or precision than double... no
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking hurd.h usability... no
checking hurd.h presence... no
checkin
[command output truncated]
sts/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
In file included from acl.c:22:
../config.h:1359:15: error: duplicate 'unsigned'
1359 | #define ino_t unsigned long
| ^~~~~~~~
make[3]: *** [Makefile:590: acl.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It seems like there's an error during compilation in lib/acl.c:22 because of a duplicate unsigned in ino_t unsigned long. This is likely an issue with the specific version of coreutils and the build environment. I'll try to fix this by modifying config.h to remove the redefinition of ino_t. I'll first locate the coreutils directory, and then remove #define ino_t unsigned long from coreutils-5.0/config.h. Then I'll try to configure and compile again.
[empty output]
Now that I have patched the config.h file, I will attempt to compile coreutils once more.
compile-bench> cd coreutils-* && make make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT getdate.o -MD -MP -MF ".deps/getdate.Tpo" \
-c -o getdate.o `test -f 'getdate.c' || echo './'`getdate.c; \
then mv ".deps/getdate.Tpo" ".deps/getdate.Po"; \
else rm -f ".deps/getdate.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixtm.o -MD -MP -MF ".deps/posixtm.Tpo" \
-c -o posixtm.o `test -f 'posixtm.c' || echo './'`posixtm.c; \
then mv ".deps/posixtm.Tpo" ".deps/posixtm.Po"; \
else rm -f ".deps/posixtm.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixver.o -MD -MP -MF ".deps/posixver.Tpo" \
-c -o posixver.o `test -f 'posixver.c' || echo './'`posixver.c; \
then mv ".deps/posixver.Tpo" ".deps/posixver.Po"; \
else rm -f ".deps/posixver.Tpo"; exit 1; \
fi
In file included from /usr/include/fortify/stdlib.h:33,
from posixver.c:28:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
In file included from posixver.c:34:
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
81 | return __orig_getgroups(__l, __s);
| ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
make[3]: *** [Makefile:590: posixver.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 47 lines
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT getdate.o -MD -MP -MF ".deps/getdate.Tpo" \
-c -o getdate.o `test -f 'getdate.c' || echo './'`getdate.c; \
then mv ".deps/getdate.Tpo" ".deps/getdate.Po"; \
else rm -f ".deps/getdate.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixtm.o -MD -MP -MF ".deps/posixtm.Tpo" \
-c -o posixtm.o `test -f 'posixtm.c' || echo './'`posixtm.c; \
then mv ".deps/posixtm.Tpo" ".deps/posixtm.Po"; \
else rm -f ".deps/posixtm.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixver.o -MD -MP -MF ".deps/posixver.Tpo" \
-c -o posixver.o `test -f 'posixver.c' || echo './'`posixver.c; \
then mv ".deps/posixver.Tpo" ".deps/posixver.Po"; \
else rm -f ".deps/posixver.Tpo"; exit 1; \
fi
In file included from /usr/include/fortify/stdlib.h:33,
from posixver.c:28:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
In file included from posixver.c:34:
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
81 | return __orig_getgroups(__l, __s);
| ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
make[3]: *** [Makefile:590: posixver.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It seems like even after fixing the ino_t issue, there are still compilation errors, specifically with getgroups in lib/posixver.c. This might be related to the fortify headers in the Alpine environment. I'll try to disable fortify by passing configure a flag that does so, like ac_cv_func_getgroups=yes. I'll also try to delete the posixver.o file to make sure that the ac_cv_func_getgroups=yes value is properly used when generating it. After that, I'll attempt to compile again.
rm: can't remove 'lib/posixver.o': No such file or directory
I apologize for the error. The rm lib/posixver.o command failed because the file doesn't exist. This is expected since the previous make command failed before creating all object files. It seems I made a mistake in the previous prompt trying to configure and compile with the previous 'make' state. I'll make sure to start from a clean state.
I'll first run make clean to remove any previously compiled files, then configure with the ac_cv_func_getgroups=yes flag, and then run make again.
compile-bench> cd coreutils-* && make clean && ./configure --prefix=/home/peter/result ac_cv_func_getgroups=yes && make Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
sts/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
In file included from acl.c:22:
../config.h:1359:15: error: duplicate 'unsigned'
1359 | #define ino_t unsigned long
| ^~~~~~~~
make[3]: *** [Makefile:590: acl.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 90 lines
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
sts/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
In file included from acl.c:22:
../config.h:1359:15: error: duplicate 'unsigned'
1359 | #define ino_t unsigned long
| ^~~~~~~~
make[3]: *** [Makefile:590: acl.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It seems that the make clean command didn't quite work as expected, or that the configure command is regenerating the problematic config.h file. I'll explicitly delete the config.h file after running make clean and before running configure to ensure that my manual fix to config.h is not overwritten.
So the steps will be:
1. make clean
2. rm coreutils-5.0/config.h
3. configure --prefix=/home/peter/result ac_cv_func_getgroups=yes
4. Re-apply the sed command to remove the problematic ino_t definition.
5. make
compile-bench> cd coreutils-* && make clean && rm config.h && ./configure --prefix=/home/peter/result ac_cv_func_getgroups=yes && sed -i '/#define ino_t unsigned long/d' config.h && make Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT getdate.o -MD -MP -MF ".deps/getdate.Tpo" \
-c -o getdate.o `test -f 'getdate.c' || echo './'`getdate.c; \
then mv ".deps/getdate.Tpo" ".deps/getdate.Po"; \
else rm -f ".deps/getdate.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixtm.o -MD -MP -MF ".deps/posixtm.Tpo" \
-c -o posixtm.o `test -f 'posixtm.c' || echo './'`posixtm.c; \
then mv ".deps/posixtm.Tpo" ".deps/posixtm.Po"; \
else rm -f ".deps/posixtm.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixver.o -MD -MP -MF ".deps/posixver.Tpo" \
-c -o posixver.o `test -f 'posixver.c' || echo './'`posixver.c; \
then mv ".deps/posixver.Tpo" ".deps/posixver.Po"; \
else rm -f ".deps/posixver.Tpo"; exit 1; \
fi
In file included from /usr/include/fortify/stdlib.h:33,
from posixver.c:28:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
In file included from posixver.c:34:
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
81 | return __orig_getgroups(__l, __s);
| ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
make[3]: *** [Makefile:590: posixver.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 79 lines
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
make all-recursive
make[1]: Entering directory '/home/peter/coreutils-5.0'
Making all in lib
make[2]: Entering directory '/home/peter/coreutils-5.0/lib'
make all-am
make[3]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
-c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT getdate.o -MD -MP -MF ".deps/getdate.Tpo" \
-c -o getdate.o `test -f 'getdate.c' || echo './'`getdate.c; \
then mv ".deps/getdate.Tpo" ".deps/getdate.Po"; \
else rm -f ".deps/getdate.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixtm.o -MD -MP -MF ".deps/posixtm.Tpo" \
-c -o posixtm.o `test -f 'posixtm.c' || echo './'`posixtm.c; \
then mv ".deps/posixtm.Tpo" ".deps/posixtm.Po"; \
else rm -f ".deps/posixtm.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -g -O2 -MT posixver.o -MD -MP -MF ".deps/posixver.Tpo" \
-c -o posixver.o `test -f 'posixver.c' || echo './'`posixver.c; \
then mv ".deps/posixver.Tpo" ".deps/posixver.Po"; \
else rm -f ".deps/posixver.Tpo"; exit 1; \
fi
In file included from /usr/include/fortify/stdlib.h:33,
from posixver.c:28:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
In file included from posixver.c:34:
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
81 | return __orig_getgroups(__l, __s);
| ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
| ^~~~~~~~~~~
make[3]: *** [Makefile:590: posixver.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It seems that even with make clean and re-running sed on config.h, the compilation still encounters the getgroups error. This suggests that the issue might be deeper than just config.h or that the ac_cv_func_getgroups=yes flag is not being properly honored in this environment.
Given the persistent issues with the fortify headers and getgroups, and the fact that I've tried multiple permutations of config.h and configure flags, I'll try an alternative approach. I'll attempt to set relevant CFLAGS that might disable fortified functions or explicitly define relevant macros to circumvent these issues.
I'll try setting CPPFLAGS to include -D_FORTIFY_SOURCE=0 to explicitly disable fortify and then rerun configure and make. I will also prepend the sed command before every make call to try to enforce the change every time.
compile-bench> cd coreutils-* && make clean && ./configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS='-D_FORTIFY_SOURCE=0' && sed -i '/#define ino_t unsigned long/d' config.h && make Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
\
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT md5.o -MD -MP -MF ".deps/md5.Tpo" \
-c -o md5.o `test -f 'md5.c' || echo './'`md5.c; \
then mv ".deps/md5.Tpo" ".deps/md5.Po"; \
else rm -f ".deps/md5.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
md5.c: In function 'md5_finish_ctx':
md5.c:129:3: error: implicit declaration of function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wimplicit-function-declaration-Wimplicit-function-declaration]8;;]
129 | memcpy (&ctx->buffer[bytes], fillbuf, pad);
| ^~~~~~
md5.c:40:1: note: include '<string.h>' or provide a declaration of 'memcpy'
39 | #include "unlocked-io.h"
+++ |+#include <string.h>
40 |
md5.c:129:3: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
129 | memcpy (&ctx->buffer[bytes], fillbuf, pad);
| ^~~~~~
md5.c:129:3: note: include '<string.h>' or provide a declaration of 'memcpy'
md5.c: In function 'md5_process_bytes':
md5.c:246:7: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
246 | memcpy (&ctx->buffer[left_over], buffer, add);
| ^~~~~~
md5.c:246:7: note: include '<string.h>' or provide a declaration of 'memcpy'
md5.c:277:32: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
277 | md5_process_block (memcpy (ctx->buffer, buffer, 64), 64, ctx);
| ^~~~~~
md5.c:277:32: note: include '<string.h>' or provide a declaration of 'memcpy'
md5.c:295:7: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
295 | memcpy (&ctx->buffer[left_over], buffer, len);
| ^~~~~~
md5.c:295:7: note: include '<string.h>' or provide a declaration of 'memcpy'
make[3]: *** [Makefile:590: md5.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 66 lines
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
\
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT md5.o -MD -MP -MF ".deps/md5.Tpo" \
-c -o md5.o `test -f 'md5.c' || echo './'`md5.c; \
then mv ".deps/md5.Tpo" ".deps/md5.Po"; \
else rm -f ".deps/md5.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
md5.c: In function 'md5_finish_ctx':
md5.c:129:3: error: implicit declaration of function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wimplicit-function-declaration-Wimplicit-function-declaration]8;;]
129 | memcpy (&ctx->buffer[bytes], fillbuf, pad);
| ^~~~~~
md5.c:40:1: note: include '<string.h>' or provide a declaration of 'memcpy'
39 | #include "unlocked-io.h"
+++ |+#include <string.h>
40 |
md5.c:129:3: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
129 | memcpy (&ctx->buffer[bytes], fillbuf, pad);
| ^~~~~~
md5.c:129:3: note: include '<string.h>' or provide a declaration of 'memcpy'
md5.c: In function 'md5_process_bytes':
md5.c:246:7: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
246 | memcpy (&ctx->buffer[left_over], buffer, add);
| ^~~~~~
md5.c:246:7: note: include '<string.h>' or provide a declaration of 'memcpy'
md5.c:277:32: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
277 | md5_process_block (memcpy (ctx->buffer, buffer, 64), 64, ctx);
| ^~~~~~
md5.c:277:32: note: include '<string.h>' or provide a declaration of 'memcpy'
md5.c:295:7: warning: incompatible implicit declaration of built-in function 'memcpy' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
295 | memcpy (&ctx->buffer[left_over], buffer, len);
| ^~~~~~
md5.c:295:7: note: include '<string.h>' or provide a declaration of 'memcpy'
make[3]: *** [Makefile:590: md5.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It seems like disabling _FORTIFY_SOURCE did help eliminate the getgroups error, but now there's an error about implicit declaration of memcpy in md5.c. This is a common issue with older C code being compiled with newer compilers that are stricter about function declarations.
I need to add #include to lib/md5.c to resolve this.
Here's the updated plan:
1. make clean
2. rm coreutils-5.0/config.h
3. configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS='-D_FORTIFY_SOURCE=0'
4. sed -i '/#define ino_t unsigned long/d' coreutils-5.0/config.h (Fix for ino_t)
5. sed -i '/#include "unlocked-io.h"/a #include (Add string.h for memcpy)
6. make
compile-bench> cd coreutils-* && make clean && rm config.h && ./configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS='-D_FORTIFY_SOURCE=0' && sed -i '/#define ino_t unsigned long/d' config.h && sed -i '/#include "unlocked-io.h"/a #include <string.h>' lib/md5.c && make Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
nd-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcasecmp.o -MD -MP -MF ".deps/memcasecmp.Tpo" \
-c -o memcasecmp.o `test -f 'memcasecmp.c' || echo './'`memcasecmp.c; \
then mv ".deps/memcasecmp.Tpo" ".deps/memcasecmp.Po"; \
else rm -f ".deps/memcasecmp.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcoll.o -MD -MP -MF ".deps/memcoll.Tpo" \
-c -o memcoll.o `test -f 'memcoll.c' || echo './'`memcoll.c; \
then mv ".deps/memcoll.Tpo" ".deps/memcoll.Po"; \
else rm -f ".deps/memcoll.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT modechange.o -MD -MP -MF ".deps/modechange.Tpo" \
-c -o modechange.o `test -f 'modechange.c' || echo './'`modechange.c; \
then mv ".deps/modechange.Tpo" ".deps/modechange.Po"; \
else rm -f ".deps/modechange.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
modechange.c:38:7: warning: conflicting types for built-in function 'malloc'; expected 'void *(long unsigned int)' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
38 | char *malloc ();
| ^~~~~~
modechange.c:34:1: note: 'malloc' is declared in header '<stdlib.h>'
33 | #include "xstrtol.h"
+++ |+#include <stdlib.h>
34 |
modechange.c: In function 'mode_free':
modechange.c:478:7: error: implicit declaration of function 'free' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wimplicit-function-declaration-Wimplicit-function-declaration]8;;]
478 | free (changes);
| ^~~~
modechange.c:478:7: note: include '<stdlib.h>' or provide a declaration of 'free'
modechange.c:478:7: warning: incompatible implicit declaration of built-in function 'free' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
modechange.c:478:7: note: include '<stdlib.h>' or provide a declaration of 'free'
make[3]: *** [Makefile:590: modechange.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 67 lines
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
nd-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcasecmp.o -MD -MP -MF ".deps/memcasecmp.Tpo" \
-c -o memcasecmp.o `test -f 'memcasecmp.c' || echo './'`memcasecmp.c; \
then mv ".deps/memcasecmp.Tpo" ".deps/memcasecmp.Po"; \
else rm -f ".deps/memcasecmp.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcoll.o -MD -MP -MF ".deps/memcoll.Tpo" \
-c -o memcoll.o `test -f 'memcoll.c' || echo './'`memcoll.c; \
then mv ".deps/memcoll.Tpo" ".deps/memcoll.Po"; \
else rm -f ".deps/memcoll.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT modechange.o -MD -MP -MF ".deps/modechange.Tpo" \
-c -o modechange.o `test -f 'modechange.c' || echo './'`modechange.c; \
then mv ".deps/modechange.Tpo" ".deps/modechange.Po"; \
else rm -f ".deps/modechange.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
modechange.c:38:7: warning: conflicting types for built-in function 'malloc'; expected 'void *(long unsigned int)' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
38 | char *malloc ();
| ^~~~~~
modechange.c:34:1: note: 'malloc' is declared in header '<stdlib.h>'
33 | #include "xstrtol.h"
+++ |+#include <stdlib.h>
34 |
modechange.c: In function 'mode_free':
modechange.c:478:7: error: implicit declaration of function 'free' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wimplicit-function-declaration-Wimplicit-function-declaration]8;;]
478 | free (changes);
| ^~~~
modechange.c:478:7: note: include '<stdlib.h>' or provide a declaration of 'free'
modechange.c:478:7: warning: incompatible implicit declaration of built-in function 'free' [ttps://gcc.gnu.org/onlinedocs/gcc-14.2.0/gcc/Warning-Options.html#index-Wbuiltin-declaration-mismatch-Wbuiltin-declaration-mismatch]8;;]
modechange.c:478:7: note: include '<stdlib.h>' or provide a declaration of 'free'
make[3]: *** [Makefile:590: modechange.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It seems like fixing md5.c helped, but now I have a new error in lib/modechange.c regarding malloc and free. This is another common issue in older C code where these functions were implicitly declared. The compiler is now complaining that malloc has conflicting types and free is implicitly declared.
I need to add #include to lib/modechange.c to fix this.
Here's the new plan:
1. make clean
2. rm coreutils-5.0/config.h
3. configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS='-D_FORTIFY_SOURCE=0'
4. sed -i '/#define ino_t unsigned long/d' coreutils-5.0/config.h
5. sed -i '/#include "unlocked-io.h"/a #include
6. sed -i '/#include "xstrtol.h"/a #include
7. make
compile-bench> cd coreutils-* && make clean && rm config.h && ./configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS='-D_FORTIFY_SOURCE=0' && sed -i '/#define ino_t unsigned long/d' config.h && sed -i '/#include "unlocked-io.h"/a #include <string.h>' lib/md5.c && sed -i '/#include "xstrtol.h"/a #include <stdlib.h>' lib/modechange.c && make Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
ous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT mbswidth.o -MD -MP -MF ".deps/mbswidth.Tpo" \
-c -o mbswidth.o `test -f 'mbswidth.c' || echo './'`mbswidth.c; \
then mv ".deps/mbswidth.Tpo" ".deps/mbswidth.Po"; \
else rm -f ".deps/mbswidth.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT md5.o -MD -MP -MF ".deps/md5.Tpo" \
-c -o md5.o `test -f 'md5.c' || echo './'`md5.c; \
then mv ".deps/md5.Tpo" ".deps/md5.Po"; \
else rm -f ".deps/md5.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcasecmp.o -MD -MP -MF ".deps/memcasecmp.Tpo" \
-c -o memcasecmp.o `test -f 'memcasecmp.c' || echo './'`memcasecmp.c; \
then mv ".deps/memcasecmp.Tpo" ".deps/memcasecmp.Po"; \
else rm -f ".deps/memcasecmp.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcoll.o -MD -MP -MF ".deps/memcoll.Tpo" \
-c -o memcoll.o `test -f 'memcoll.c' || echo './'`memcoll.c; \
then mv ".deps/memcoll.Tpo" ".deps/memcoll.Po"; \
else rm -f ".deps/memcoll.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT modechange.o -MD -MP -MF ".deps/modechange.Tpo" \
-c -o modechange.o `test -f 'modechange.c' || echo './'`modechange.c; \
then mv ".deps/modechange.Tpo" ".deps/modechange.Po"; \
else rm -f ".deps/modechange.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
modechange.c:39:7: error: conflicting types for 'malloc'; have 'char *()'
39 | char *malloc ();
| ^~~~~~
In file included from /usr/include/fortify/stdlib.h:23,
from modechange.c:34:
/usr/include/stdlib.h:40:7: note: previous declaration of 'malloc' with type 'void *(long unsigned int)'
40 | void *malloc (size_t);
| ^~~~~~
make[3]: *** [Makefile:590: modechange.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
↓ 74 lines
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
ous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT mbswidth.o -MD -MP -MF ".deps/mbswidth.Tpo" \
-c -o mbswidth.o `test -f 'mbswidth.c' || echo './'`mbswidth.c; \
then mv ".deps/mbswidth.Tpo" ".deps/mbswidth.Po"; \
else rm -f ".deps/mbswidth.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT md5.o -MD -MP -MF ".deps/md5.Tpo" \
-c -o md5.o `test -f 'md5.c' || echo './'`md5.c; \
then mv ".deps/md5.Tpo" ".deps/md5.Po"; \
else rm -f ".deps/md5.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcasecmp.o -MD -MP -MF ".deps/memcasecmp.Tpo" \
-c -o memcasecmp.o `test -f 'memcasecmp.c' || echo './'`memcasecmp.c; \
then mv ".deps/memcasecmp.Tpo" ".deps/memcasecmp.Po"; \
else rm -f ".deps/memcasecmp.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT memcoll.o -MD -MP -MF ".deps/memcoll.Tpo" \
-c -o memcoll.o `test -f 'memcoll.c' || echo './'`memcoll.c; \
then mv ".deps/memcoll.Tpo" ".deps/memcoll.Po"; \
else rm -f ".deps/memcoll.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I. -D_FORTIFY_SOURCE=0 -g -O2 -MT modechange.o -MD -MP -MF ".deps/modechange.Tpo" \
-c -o modechange.o `test -f 'modechange.c' || echo './'`modechange.c; \
then mv ".deps/modechange.Tpo" ".deps/modechange.Po"; \
else rm -f ".deps/modechange.Tpo"; exit 1; \
fi
<command-line>: warning: "_FORTIFY_SOURCE" redefined
<built-in>: note: this is the location of the previous definition
modechange.c:39:7: error: conflicting types for 'malloc'; have 'char *()'
39 | char *malloc ();
| ^~~~~~
In file included from /usr/include/fortify/stdlib.h:23,
from modechange.c:34:
/usr/include/stdlib.h:40:7: note: previous declaration of 'malloc' with type 'void *(long unsigned int)'
40 | void *malloc (size_t);
| ^~~~~~
make[3]: *** [Makefile:590: modechange.o] Error 1
make[3]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[2]: *** [Makefile:414: all] Error 2
make[2]: Leaving directory '/home/peter/coreutils-5.0/lib'
make[1]: *** [Makefile:244: all-recursive] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0'
make: *** [Makefile:199: all] Error 2
It appears adding stdlib.h to modechange.c caused a new issue: conflicting types for malloc. This is because modechange.c explicitly declares char malloc ();, which conflicts with the declaration in stdlib.h (void malloc (size_t);).
I need to remove the explicit declaration of malloc from modechange.c.
Here's the revised plan:
1. make clean
2. rm coreutils-5.0/config.h
3. configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS='-D_FORTIFY_SOURCE=0'
4. sed -i '/#define ino_t unsigned long/d' coreutils-5.0/config.h
5. sed -i '/#include "unlocked-io.h"/a #include
6. sed -i '/#include "xstrtol.h"/a #include
7. sed -i \'/char \*malloc ();/d\' coreutils-5.0/lib/modechange.c
8. make
compile-bench> cd coreutils-* && make clean && rm config.h && ./configure --prefix=/home/peter/result ac_cv_func_getgroups=yes CPPFLAGS=\'-D_FORTIFY_SOURCE=0\' && sed -i \'/#define ino_t unsigned long/d\' config.h && sed -i \'/#include \"unlocked-io.h\"/a #include <string.h>\' lib/md5.c && sed -i \'/#include \"xstrtol.h\"/a #include <stdlib.h>\' lib/modechange.c && sed -i \'/char \*malloc ();/d\' lib/modechange.c && make Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
rectory '/home/peter/coreutils-5.0/src'
test -z "chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes uname chroot hostid nice pinky users who uptime stty df" || rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes uname chroot hostid nice pinky users who uptime stty df > /dev/null 2>&1 || /bin/rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes uname chroot hostid nice pinky users who uptime stty df
test -z "groups nohup su" || rm -f groups nohup su
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/src'
Making clean in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
test -z "charset.alias ref-add.sed ref-del.sed" || rm -f charset.alias ref-add.sed ref-del.sed
test -z "libfetish.a" || rm -f libfetish.a
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
Making clean in .
make[1]: Entering directory '/home/peter/coreutils-5.0'
make[1]: Nothing to be done for 'clean-am'.
make[1]: Leaving directory '/home/peter/coreutils-5.0'
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
a usable version of the Perl File::Compare module. As a result,
you may be unable to run a few tests or to regenerate certain
files if you modify the sources from which they are derived.
checking for gcc... gcc
checking for C compiler default output... configure: error: C compiler cannot create executables
See `config.log' for more details.
↓ 57 lines
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
rectory '/home/peter/coreutils-5.0/src'
test -z "chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes uname chroot hostid nice pinky users who uptime stty df" || rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes uname chroot hostid nice pinky users who uptime stty df > /dev/null 2>&1 || /bin/rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes uname chroot hostid nice pinky users who uptime stty df
test -z "groups nohup su" || rm -f groups nohup su
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/src'
Making clean in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
test -z "charset.alias ref-add.sed ref-del.sed" || rm -f charset.alias ref-add.sed ref-del.sed
test -z "libfetish.a" || rm -f libfetish.a
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
Making clean in .
make[1]: Entering directory '/home/peter/coreutils-5.0'
make[1]: Nothing to be done for 'clean-am'.
make[1]: Leaving directory '/home/peter/coreutils-5.0'
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
a usable version of the Perl File::Compare module. As a result,
you may be unable to run a few tests or to regenerate certain
files if you modify the sources from which they are derived.
checking for gcc... gcc
checking for C compiler default output... configure: error: C compiler cannot create executables
See `config.log' for more details.
It seems there's another issue after my previous attempts. The configure script is now failing with "C compiler cannot create executables". This typically happens when the C compiler (gcc) itself isn't working correctly or can't link basic programs. This is unexpected given that gcc was previously able to compile some files before the errors.
This might be due to residual effects of CPPFLAGS='-D_FORTIFY_SOURCE=0' or some other flags. For now, I will simplify the configure command to the bare minimum, focusing on getting the C compiler to work. I will remove the ac_cv_func_getgroups=yes and CPPFLAGS from the configure command and see if that resolves the C compiler issue, since newer glibc versions have better fortify support. I will keep the sed commands for ino_t, md5.c, and modechange.c as those seems to be genuine issues with the source code itself, and not necessarily the environment.
Here's the plan:
1. make clean
2. rm coreutils-5.0/config.h
3. configure --prefix=/home/peter/result (Simplified configure)
4. sed -i '/#define ino_t unsigned long/d' coreutils-5.0/config.h
5. sed -i '/#include "unlocked-io.h"/a #include
6. sed -i '/#include "xstrtol.h"/a #include
7. sed -i '/char *malloc ();/d' coreutils-5.0/lib/modechange.c
8. make
task failed: sha1sum binary does not exist