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Summary
Task
coreutils-old-version-alpine
Model
gpt-oss-120b-high logo
gpt-oss-120b-high
Status
Failed
Performance
Cost$0.050
Total elapsed time1m53s
LLM inference time1m3s
Command execution time50s
Commands executed33
All details >
Attempt ID 9pykuf8y8q5v5 Attempt group run-16-09-22-05
Revision fb5c74bd2fee AWS Instance m8i.2xlarge
Start time 2025-09-16T22:01:55.139Z End time 2025-09-16T22:03:48.917Z
Task coreutils-old-version-alpine Environment alpine-3.22.1-amd64-offline
Model gpt-oss-120b-high logo gpt-oss-120b-high OpenRouter slug openai/gpt-oss-120b
Temperature 1 Explicit prompt caching false
User msg after tool call false Max tool calls 200
Total timeout seconds 2400 Single command timeout 900
Cost $0.050 Duration 1m53s
LLM inference time 1m3s Command execution time 50s
Final context tokens 21,351 Total output tokens 6,556
Output reasoning tokens 5,727 Messages 69
Assistant messages 34 User messages 1
System messages 1 Commands executed 33
Download full attempt result JSON
Task
Task: coreutils-old-version-alpine

GNU coreutils 5.0 (from 2003) is a collection of Linux utilities like ls, cp, mv, etc.
Project link: gnu.org/software/coreutils

Task:
Compile and install all coreutils utilities to a specific location.

Difficulties:
The source is very old (2003) and requires heavy patching. On Alpine Linux (with musl) the code requires even more patching.

Environment:
Alpine Linux 3.22.1 on amd64, without internet access.

View task page
Execution log
SYSTEM

You are a package-building specialist operating a Alpine Linux 3.22.1 bash shell via one tool: run_terminal_cmd.
The current working directory of every run_terminal_cmd is /home/peter.
Execution rules:
- Always pass non-interactive flags for any command that could prompt (e.g., -y, --yes).
- Don't include any newlines in the command.
- The environment is offline, assume you have all the necessary tools already installed.
If you encounter any errors or issues while doing the user's request, you must fix them and continue the task.
At the end verify you did the user request correctly.

USER

You are given a coreutils v5.0 source code at /home/peter/coreutils.tar.gz. Please compile the coreutils package and install it to /home/peter/result. Create symlinks for all coreutils utilities so they are available under /home/peter/result/. For example: /home/peter/result/uptime should point to the compiled uptime binary.

ASSISTANT
Show reasoning

We need to unpack coreutils source, compile, install to given prefix /home/peter/result. Then create symlinks for each utility binary inside that directory pointing to the binary? Probably the binaries will be installed into /home/peter/result/bin, but requirement: symlinks for all coreutils utilities so they are available under /home/peter/result/. That means in result root create symlink named each utility pointing to its binary in bin.

Steps:
1. Extract tar.gz.
2. cd to source dir.
3. Configure with prefix=/home/peter/result.
4. make && make install.
5. Then find installed binaries in /home/peter/result/bin, create symlinks in /home/peter/result/ with same names pointing to bin/.
Also maybe need to include allls /home/peter/result/bin` to create symlinks.

Let's implement.

compile-bench> tar -xzf coreutils.tar.gz
[empty output]
ASSISTANT
Show reasoning

We extracted tar. Need to see directory.

compile-bench> ls -R
.:
coreutils-5.0     coreutils.tar.gz

./coreutils-5.0:
ABOUT-NLS              NEWS                   configure
AUTHORS                README                 configure.ac
COPYING                THANKS                 doc
ChangeLog              THANKS-to-translators  lib
GNUmakefile            THANKStt.in            m4
INSTALL                TODO                   man
Makefile.am            aclocal.m4             old
Makefile.cfg           announce-gen           po
Makefile.in            config                 src
Makefile.maint         config.hin             tests

./coreutils-5.0/config:
ChangeLog      config.rpath   depcomp        mdate-sh       mkinstalldirs
config.guess   config.sub     install-sh     missing        texinfo.tex

./coreutils-5.0/doc:
ChangeLog        constants.texi   doclicense.texi  stamp-vti
Makefile.am      coreutils.info   getdate.texi     version.texi
Makefile.in      coreutils.texi   perm.texi

./coreutils-5.0/lib:
ChangeLog        ftw_.h           memchr.c         sha.c
Makefile.am      full-read.c      memcmp.c         sha.h
Makefile.in      full-read.h      memcoll.c        sig2str.c
README           full-write.c     memcoll.h        sig2str.h
TODO             full-write.h     memcpy.c         stat.c
__fpending.c     getcwd.c         memmove.c        stdio-safer.h
__fpending.h     getdate.c        memrchr.c        stpcpy.c
acl.c            getdate.h        memset.c         strcasecmp.c
acl.h            getdate.y        mkdir.c          strcspn.c
addext.c         getgroups.c      mkstemp.c        strdup.c
alloca.c         gethostname.c    mktime.c         strftime.c
argmatch.c       getline.c        modechange.c     strftime.h
argmatch.h       getline.h        modechange.h     stripslash.c
atexit.c         getloadavg.c     mountlist.c      strncasecmp.c
backupfile.c     getopt.c         mountlist.h      strndup.c
backupfile.h     getopt.h         nanosleep.c      strnlen.c
basename.c       getopt1.c        obstack.c        strpbrk.c
bumpalloc.h      getpagesize.h    obstack.h        strstr.c
canon-host.c     getpass.c        offtostr.c       strtod.c
canonicalize.c   getstr.c         path-concat.c    strtoimax.c
canonicalize.h   getstr.h         path-concat.h    strtol.c
chown.c          gettext.h        pathmax.h        strtoll.c
closeout.c       gettime.c        physmem.c        strtoul.c
closeout.h       gettimeofday.c   physmem.h        strtoull.c
config.charset   getugroups.c     posixtm.c        strtoumax.c
cycle-check.c    getusershell.c   posixtm.h        strverscmp.c
cycle-check.h    group-member.c   posixver.c       strverscmp.h
dev-ino.h        group-member.h   posixver.h       tempname.c
diacrit.c        hard-locale.c    putenv.c         timespec.h
diacrit.h        hard-locale.h    quote.c          tsearch.c
dirfd.c          hash-pjw.c       quote.h          umaxtostr.c
dirfd.h          hash-pjw.h       quotearg.c       unicodeio.c
dirname.c        ha
[command output truncated]
       rep-cclass.X  u.I
6.I           empty-cc.I    null.I        ross-0a.I     u.X
6.X           empty-cc.X    null.X        ross-0a.X     upcase.I
7.I           empty-eq.I    o-rep-1.I     ross-0b.I     upcase.X
7.X           empty-eq.X    o-rep-1.X     ross-0b.X     v.I
8.I           esc.I         o-rep-2.I     ross-1a.I     v.X
8.X           esc.X         o-rep-2.X     ross-1a.X     w.I
9.I           f.I           o.I           ross-1b.I     w.X
9.X           f.X           o.X           ross-1b.X     x.I
Makefile.am   g.I           p.I           ross-2.I      x.X
Makefile.in   g.X           p.X           ross-2.X      y.I
TODO          h.I           q.I           ross-3.I      y.X
Test.pm       h.X           q.X           ross-3.X      z.I
a.I           i.I           r.I           ross-4.I      z.X
a.X           i.X           r.X           ross-4.X

./coreutils-5.0/tests/tsort:
Makefile.am  Makefile.in  basic-1

./coreutils-5.0/tests/unexpand:
Makefile.am  Makefile.in  basic-1

./coreutils-5.0/tests/uniq:
1.I          115.X        23.I         5.X          61.I         92.X
1.X          116.I        23.X         50.I         61.X         93.I
10.I         116.X        3.I          50.X         62.I         93.X
10.X         117.I        3.X          51.I         62.X         94.I
101.I        117.X        31.I         51.X         63.I         94.X
101.X        118.I        31.X         52.I         63.X         Makefile.am
102.I        118.X        32.I         52.X         64.I         Makefile.in
102.X        119.I        32.X         53.I         64.X         Test.pm
11.I         119.X        33.I         53.X         65.I         obs30.I
11.X         12.I         33.X         54.I         65.X         obs30.X
110.I        12.X         34.I         54.X         7.I          obs40.I
110.X        13.I         34.X         55.I         7.X          obs40.X
111.I        13.X         35.I         55.X         8.I          obs41.I
111.X        2.I          35.X         56.I         8.X          obs41.X
112.I        2.X          4.I          56.X         9.I          obs44.I
112.X        20.I         4.X          57.I         9.X          obs44.X
113.I        20.X         42.I         57.X         90.I         obs45.I
113.X        21.I         42.X         6.I          90.X         obs45.X
114.I        21.X         43.I         6.X          91.I         uniq-tests
114.X        22.I         43.X         60.I         91.X
115.I        22.X         5.I          60.X         92.I

./coreutils-5.0/tests/wc:
Makefile.am  a1.X         a4.X         a7.X         b0.X         c1.X
Makefile.in  a2.I         a5.I         a8.I         b1.I         c2.I
Test.pm      a2.X         a5.X         a8.X         b1.X         c2.X
a0.I         a3.I         a6.I         a9.I         c0.I         wc-tests
a0.X         a3.X         a6.X         a9.X         c0.X
a1.I         a4.I         a7.I         b0.I         c1.I
↓ 112 lines
ASSISTANT
Show reasoning

We need to compile coreutils 5.0. Usually need to run ./configure with prefix, then make, then make install. Need to install to /home/peter/result. Also need symlinks for each utility to its binary. In coreutils, each utility is a separate binary (e.g., src/uptime). After make install, they will be installed into prefix/bin. We'll set prefix to /home/peter/result. Then after install, create symlinks in /home/peter/result for each binary (maybe they are already there). Actually install will place binaries in /home/peter/result/bin. The request wants symlinks directly under /home/peter/result/. So we need to create symlinks from each binary in bin to result root.

Steps:

1. cd coreutils-5.0
2. ./configure --disable-nls --prefix=/home/peter/result (maybe need to disable NLS due to missing gettext). Use non-interactive.
3. make -j$(nproc)
4. make install
5. Then create symlinks: for each file in /home/peter/result/bin/* (executable), create symlink in /home/peter/result with same name pointing to bin/. Use ln -s.

Let's execute.

compile-bench> cd coreutils-5.0 && ./configure --disable-nls --prefix=/home/peter/result
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
         a usable version of the Perl File::Compare module.  As a result,
         you may be unable to run a few tests or to regenerate certain
         files if you modify the sources from which they are derived.
 
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking whether gcc needs -traditional... no
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for AIX... no
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking for uname... yes
checking for chroot... yes
checking for gethostid... yes
checking for strerror in -lcposix... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGE_FILES value needed for large files... no
checking for gcc option to accept ANSI C... none needed
checking for function prototypes... yes
checking for ANSI C header files... (cached) no
checking for string.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for inline... inline
checking for working long double with more range or precision than double... no
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
[command output truncated]
configure: WARNING:     ## ------------------------------------ ##
checking for shadow.h... yes
checking for struct spwd.sp_pwdp... no
checking for getspnam... yes
checking for library containing crypt... none required
checking for msgfmt... no
checking for gmsgfmt... :
checking for xgettext... no
checking for msgmerge... no
checking whether NLS is requested... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating lib/Makefile
config.status: creating man/Makefile
config.status: creating m4/Makefile
config.status: creating po/Makefile.in
config.status: creating src/Makefile
config.status: creating tests/Makefile
config.status: creating tests/basename/Makefile
config.status: creating tests/chgrp/Makefile
config.status: creating tests/chmod/Makefile
config.status: creating tests/chown/Makefile
config.status: creating tests/cp/Makefile
config.status: creating tests/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
↓ 141 lines
ASSISTANT
Show reasoning

We need to compile and install to /home/peter/result, then create symlinks for each utility binary under that directory (i.e., /home/peter/result/ pointing to the actual binary). Usually after make install, binaries go to prefix/bin. So they will be in /home/peter/result/bin. We need symlinks in /home/peter/result (top-level) pointing to those binaries.

Steps:
- make -j$(nproc) maybe.
- make install.
- Then create symlinks: find all files in /home/peter/result/bin (executable files) and for each create symlink in /home/peter/result with same name pointing to bin/. Ensure not to overwrite existing directories.

Let's run make.

compile-bench> cd coreutils-5.0 && make -j$(nproc) > /dev/null 2>&1 && echo done
[empty output]
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory. The make command didn't output "done" because we piped to echo? Actually we used && echo done after make, but output empty. Possibly make failed? Let's check exit status? Not given. Let's run make install.

compile-bench> cd coreutils-5.0 && make install -j$(nproc) > /dev/null 2>&1 && echo installed
[empty output]
ASSISTANT
Show reasoning

We need to compile coreutils, install to /home/peter/result, create symlinks for each binary under that directory.

Check that the install placed binaries under /home/peter/result/bin presumably. The configure prefix set to /home/peter/result. So binaries likely in /home/peter/result/bin.

We need to create symlinks so that each utility binary is also directly accessible as /home/peter/result/. For each file in bin directory that is an executable (not directories). Create symlink: ln -s bin/ result/.

Let's list result directory.

compile-bench> ls -R /home/peter/result
ls: /home/peter/result: No such file or directory
ASSISTANT
Show reasoning

The installation likely defaulted to /usr/local? We set prefix to /home/peter/result but the directory does not exist. Possibly configure succeeded but make install didn't create because missing write permission? But we have permission in home. Let's check if result directory exists hidden. Let's list /home/peter.

compile-bench> ls -a /home/peter
.                 ..                coreutils-5.0     coreutils.tar.gz
ASSISTANT
Show reasoning

The install likely defaulted to /usr/local or something because prefix not used? Actually we passed --prefix=/home/peter/result, but maybe make install didn't create directory because not existent? It should create. But result missing. Let's check where binaries installed. Maybe default prefix is /usr/local, so check /usr/local/bin.

compile-bench> ls /usr/local/bin | head
[empty output]
ASSISTANT
Show reasoning

We tried to install to prefix /home/peter/result, but result directory didn't exist. Usually make install will create it. Maybe the install step failed because of missing write permission? It should create. Let's see if any error logs suppressed. We redirected output to /dev/null, losing errors. Let's run make install without redirection to see.

compile-bench> cd coreutils-5.0 && make install
Making install in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT acl.o -MD -MP -MF ".deps/acl.Tpo" \
  -c -o acl.o `test -f 'acl.c' || echo './'`acl.c; \
then mv ".deps/acl.Tpo" ".deps/acl.Po"; \
else rm -f ".deps/acl.Tpo"; exit 1; \
fi
In file included from acl.c:22:
../config.h:1359:15: error: duplicate 'unsigned'
 1359 | #define ino_t unsigned long
      |               ^~~~~~~~
make[1]: *** [Makefile:590: acl.o] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
make: *** [Makefile:244: install-recursive] Error 1
↓ 15 lines
ASSISTANT
Show reasoning

The install failed due to duplicate definition of ino_t in config.h. Possibly because we already have system's ino_t defined. In coreutils older version expects to define it but on modern glibc it's already defined. Usually configure would detect and avoid redefining. Maybe we need to pass a flag to disable that definition: maybe use --disable-ino64? Not sure. Let's inspect config.h around that line.

compile-bench> sed -n '1350,1370p' coreutils-5.0/config.h
/* Define to `int' if <sys/types.h> doesn't define. */
/* #undef gid_t */

/* Define as `__inline' if that's what the C compiler calls it, or to nothing
   if it is not supported. */
/* #undef inline */

/* Define to `unsigned long' if <sys/types.h> does not define. */
#define ino_t unsigned long

/* Define to widest signed type if <inttypes.h> doesn't define. */
/* #undef intmax_t */

/* Define to rpl_localtime if the replacement function should be used. */
#define localtime rpl_localtime

/* Define to `unsigned int' if <sys/types.h> does not define. */
#define major_t unsigned int

/* Define to rpl_malloc if the replacement function should be used. */
↓ 21 lines
ASSISTANT
Show reasoning

We have an error building coreutils due to duplicate definition of ino_t in config.h (maybe system header already defines ino_t). Typically config.h should have #define ino_t ... only if not defined. Might need to comment out that line. Could patch config.h.

Also earlier we attempted make install with prefix to /home/peter/result. The first make succeeded but install failed due to building lib after? Actually earlier we did make (successful) then make install -j... which triggered error. So need to fix config.h before reinstall.

Let's edit config.h: comment out or undef before define. We'll replace line with comment.

We'll use sed to comment out that define.

compile-bench> apply_patch <<'PATCH' *** Begin Patch *** Update File: coreutils-5.0/config.h @@ -/* Define to `unsigned long' if <sys/types.h> does not define. */ -#define ino_t unsigned long +/* Define to `unsigned long' if <sys/types.h> does not define. */ +/* Disabled duplicate definition of ino_t for modern systems where it is already defined. */ +/* #define ino_t unsigned long */ *** End Patch PATCH
bash: apply_patch: command not found
ASSISTANT
Show reasoning

We need to edit file, but apply_patch command not available. Use sed to comment out line. Use ed or sed -i. Let's comment out the #define line by adding // or / /. Since C header uses #define, comment with / /. We'll replace line with comment. Use sed -i.

compile-bench> sed -i 's/^#define ino_t unsigned long/\/\* #define ino_t unsigned long *\//g' coreutils-5.0/config.h
[empty output]
ASSISTANT
Show reasoning

We need compile coreutils. We hit duplicate definition of ino_t in config.h. Comment out that line.

Now re-run make install. First maybe need to clean prior failed build. Run make clean then install.

compile-bench> cd coreutils-5.0 && make clean
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
 coreutils.1po coreutils.2po *.new.po
rm -fr *.o
make[1]: Leaving directory '/home/peter/coreutils-5.0/po'
Making clean in m4
make[1]: Entering directory '/home/peter/coreutils-5.0/m4'
make[1]: Nothing to be done for 'clean'.
make[1]: Leaving directory '/home/peter/coreutils-5.0/m4'
Making clean in man
make[1]: Entering directory '/home/peter/coreutils-5.0/man'
make[1]: Nothing to be done for 'clean'.
make[1]: Leaving directory '/home/peter/coreutils-5.0/man'
Making clean in doc
make[1]: Entering directory '/home/peter/coreutils-5.0/doc'
rm -f coreutils.aux coreutils.cp coreutils.cps coreutils.fl coreutils.fn \
  coreutils.ky coreutils.log coreutils.op coreutils.pg \
  coreutils.tmp coreutils.toc coreutils.tp coreutils.tps \
  coreutils.vr coreutils.dvi coreutils.pdf coreutils.ps
rm -f vti.tmp
make[1]: Leaving directory '/home/peter/coreutils-5.0/doc'
Making clean in src
make[1]: Entering directory '/home/peter/coreutils-5.0/src'
test -z "chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who " || rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who  > /dev/null 2>&1 || /bin/rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who 
test -z "groups  nohup su" || rm -f groups  nohup su
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/src'
Making clean in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
test -z "charset.alias ref-add.sed ref-del.sed" || rm -f charset.alias ref-add.sed ref-del.sed
test -z "libfetish.a" || rm -f libfetish.a
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
Making clean in .
make[1]: Entering directory '/home/peter/coreutils-5.0'
make[1]: Nothing to be done for 'clean-am'.
make[1]: Leaving directory '/home/peter/coreutils-5.0'
↓ 58 lines
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory (the binaries themselves are likely installed into /home/peter/result/bin). The request: "Create symlinks for all coreutils utilities so they are available under /home/peter/result/" i.e., each utility name directly under result, pointing to the compiled binary (likely in result/bin/).

First, after adjusting config.h, we need to reconfigure maybe? Already configured earlier, but after editing config.h we may need to run make again. Let's run make again, then make install.

compile-bench> cd coreutils-5.0 && make -j$(nproc) > /dev/null 2>&1 && echo build_done
[empty output]
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory.

We attempted configure with prefix /home/peter/result, but install failed due to duplicate ino_t definition. We patched config.h to comment out that define. Build succeeded? We ran make after cleaning, but we didn't see errors. The make command output was empty (maybe succeeded). Need to verify that binaries exist in result.

Check /home/peter/result/bin maybe.

compile-bench> ls -R /home/peter/result
ls: /home/peter/result: No such file or directory
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result. The configure used prefix /home/peter/result, but make install failed due to duplicate ino_t definition. We patched config.h to comment out that define. However make install still didn't create result directory. Perhaps make install didn't run because of error earlier. After patch and clean, we need to re-run configure? The config.h is generated by configure; patching it may be overwritten if we re-run configure. But we already have config.h patched. However make install previously attempted to compile lib with that config.h and failed. After cleaning, we need to re-run make (maybe make all) then make install. Also need to ensure result directory exists; make install should create it. Let's run make again.

compile-bench> cd coreutils-5.0 && make -j$(nproc) > /dev/null 2>&1 && echo build_ok
[empty output]
ASSISTANT
Show reasoning

The build likely succeeded but install didn't create target dir. Need to ensure result dir exists. configure used prefix /home/peter/result, but make install failed earlier due to ino_t duplicate. After patch, we need to reconfigure? The config.h was edited, but need to re-run configure to regenerate Makefiles with new config.h? Might just re-run make install now; ensure result dir exists.

Create directory /home/peter/result. Then make install.

compile-bench> mkdir -p /home/peter/result
[empty output]
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory (i.e., each binary already installed there? Usually install puts binaries in prefix/bin. We used --prefix=/home/peter/result, so binaries go to /home/peter/result/bin. The user wants symlinks for all utilities directly under /home/peter/result/ pointing to compiled binary. So need to create symlinks from /home/peter/result/bin/* to /home/peter/result/. After building, we haven't installed successfully due to earlier error. We need to reconfigure after patch? The duplicate ino_t definition caused compile error only during install? Actually earlier make install attempted to compile lib again after patch, but maybe still errors elsewhere. Let's try to run make clean, then reconfigure, then make, then make install with prefix. Possibly other errors. Let's run configure again after patch.

compile-bench> cd coreutils-5.0 && ./configure --disable-nls --prefix=/home/peter/result
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
         a usable version of the Perl File::Compare module.  As a result,
         you may be unable to run a few tests or to regenerate certain
         files if you modify the sources from which they are derived.
 
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking whether gcc needs -traditional... no
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for AIX... no
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking for uname... yes
checking for chroot... yes
checking for gethostid... yes
checking for strerror in -lcposix... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGE_FILES value needed for large files... no
checking for gcc option to accept ANSI C... none needed
checking for function prototypes... yes
checking for ANSI C header files... (cached) no
checking for string.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for inline... inline
checking for working long double with more range or precision than double... no
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
[command output truncated]
configure: WARNING:     ## ------------------------------------ ##
checking for shadow.h... yes
checking for struct spwd.sp_pwdp... no
checking for getspnam... yes
checking for library containing crypt... none required
checking for msgfmt... no
checking for gmsgfmt... :
checking for xgettext... no
checking for msgmerge... no
checking whether NLS is requested... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating lib/Makefile
config.status: creating man/Makefile
config.status: creating m4/Makefile
config.status: creating po/Makefile.in
config.status: creating src/Makefile
config.status: creating tests/Makefile
config.status: creating tests/basename/Makefile
config.status: creating tests/chgrp/Makefile
config.status: creating tests/chmod/Makefile
config.status: creating tests/chown/Makefile
config.status: creating tests/cp/Makefile
config.status: creating tests/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
↓ 141 lines
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result. We attempted compile earlier but got error due to duplicate ino_t definition. We commented it out using sed. Need to rebuild configure? We already edited config.h. However configure rewrites config.h each run, potentially restoring the problematic definition. Indeed we just re-ran configure, which regenerated config.h, reintroducing the problematic #define. So our edit got overwritten. We need to prevent that definition, perhaps by editing config.h after configure and before make install, but also need to ensure make uses that. Simpler: after configure, edit config.h to comment out #define ino_t line. Then make. Also we may need to adjust other places? The error happened in lib/acl.c where config.h defines ino_t, but system already defines ino_t via sys/types.h leading conflict. Commenting out should fix compile errors.

So steps: run configure again (already done), then edit config.h to comment out that line. Then run make. Then make install with prefix = /home/peter/result. Ensure result directory exists.

Let's edit config.h now.

compile-bench> sed -i 's/^#define ino_t unsigned long/\/\* #define ino_t unsigned long *\//' coreutils-5.0/config.h
[empty output]
ASSISTANT
Show reasoning

The user wants to compile coreutils v5.0 source from coreutils.tar.gz, install to /home/peter/result, and create symlinks for all utilities under /home/peter/result/ pointing to the compiled binary. The source tree has been extracted; we tried to configure and compile. Initially we had compile error due to duplicate ino_t definition. We commented out that macro in config.h. However after that we have not yet rebuilt (we cleaned and rebuilt). Build succeeded? We haven't checked. It seems we did make -j$(nproc) after commenting out and cleaning; output suppressed, but we need to verify if build succeeded.

Now we need to run make install with prefix /home/peter/result. Then create symlinks. But coreutils install typically creates binaries in bin/ under prefix (so /home/peter/result/bin). The request is to place symlinks directly under result directory (not bin). So we must create symlinks in /home/peter/result for each utility binary that ends up installed in bin.

First ensure compile succeeded. Let's list files in coreutils-5.0/src and bin after make.

compile-bench> ls coreutils-5.0/src | wc -l
114
ASSISTANT
Show reasoning

We need to compile coreutils, then install to /home/peter/result, then create symlinks for each utility to its binary. The earlier attempt failed due to duplicate ino_t definition. We commented it out. Now we need to reconfigure? Already re-ran configure, but after editing config.h we need to re-run make clean then make, then make install.

Steps:

1. Ensure config.h updated.
2. Run make clean (maybe needed)
3. Build with make.
4. Install with make install.
5. After install, the binaries should be installed under prefix/bin (i.e., /home/peter/result/bin). Then we need to create symlinks for each utility directly under /home/peter/result (not inside bin). So for every executable under result/bin, create a symlink at result/ pointing to bin/.

Thus tasks:

- make clean (optional)
- make all
- make install

Let's run make clean, then make, then install.

compile-bench> cd coreutils-5.0 && make clean
Making clean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making clean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making clean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making clean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making clean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
make[2]: Nothing to be done for 'clean'.
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making clean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.E ross-0
[command output truncated]
 coreutils.1po coreutils.2po *.new.po
rm -fr *.o
make[1]: Leaving directory '/home/peter/coreutils-5.0/po'
Making clean in m4
make[1]: Entering directory '/home/peter/coreutils-5.0/m4'
make[1]: Nothing to be done for 'clean'.
make[1]: Leaving directory '/home/peter/coreutils-5.0/m4'
Making clean in man
make[1]: Entering directory '/home/peter/coreutils-5.0/man'
make[1]: Nothing to be done for 'clean'.
make[1]: Leaving directory '/home/peter/coreutils-5.0/man'
Making clean in doc
make[1]: Entering directory '/home/peter/coreutils-5.0/doc'
rm -f coreutils.aux coreutils.cp coreutils.cps coreutils.fl coreutils.fn \
  coreutils.ky coreutils.log coreutils.op coreutils.pg \
  coreutils.tmp coreutils.toc coreutils.tp coreutils.tps \
  coreutils.vr coreutils.dvi coreutils.pdf coreutils.ps
rm -f vti.tmp
make[1]: Leaving directory '/home/peter/coreutils-5.0/doc'
Making clean in src
make[1]: Entering directory '/home/peter/coreutils-5.0/src'
test -z "chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who " || rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who  > /dev/null 2>&1 || /bin/rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who 
test -z "groups  nohup su" || rm -f groups  nohup su
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/src'
Making clean in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
test -z "charset.alias ref-add.sed ref-del.sed" || rm -f charset.alias ref-add.sed ref-del.sed
test -z "libfetish.a" || rm -f libfetish.a
rm -f *.o core *.core
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
Making clean in .
make[1]: Entering directory '/home/peter/coreutils-5.0'
make[1]: Nothing to be done for 'clean-am'.
make[1]: Leaving directory '/home/peter/coreutils-5.0'
↓ 58 lines
ASSISTANT
Show reasoning

We need to compile coreutils, install to /home/peter/result, then create symlinks for each utility pointing to the compiled binaries. The compilation earlier had error due to duplicate ino_t definition; we commented it out. Need to reconfigure? We already reconfigured after editing config.h? Actually we edited config.h after re-running configure. But need to re-run configure to regenerate makefiles? Might be okay; config.h used by compilation. We'll run make again and install.

Proceed: make -j$(nproc) then make install. Then list installed binaries under bin directory.

After install, create symlinks: for each file in /home/peter/result/bin, create symlink in /home/peter/result/ pointing to bin/. Ensure symlinks not overwrite directories.

Let's run make again.

compile-bench> cd coreutils-5.0 && make -j$(nproc) > /dev/null 2>&1 && echo built
[empty output]
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory.

We attempted configure with prefix /home/peter/result, but we commented out ino_t definition to avoid duplicate. Build succeeded? We ran make -j$(nproc) and got no output (maybe succeeded). Need to run make install to install binaries to prefix.

Let's run make install.

compile-bench> cd coreutils-5.0 && make install -j$(nproc)
Making install in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT posixver.o -MD -MP -MF ".deps/posixver.Tpo" \
  -c -o posixver.o `test -f 'posixver.c' || echo './'`posixver.c; \
then mv ".deps/posixver.Tpo" ".deps/posixver.Po"; \
else rm -f ".deps/posixver.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT hash-pjw.o -MD -MP -MF ".deps/hash-pjw.Tpo" \
  -c -o hash-pjw.o `test -f 'hash-pjw.c' || echo './'`hash-pjw.c; \
then mv ".deps/hash-pjw.Tpo" ".deps/hash-pjw.Po"; \
else rm -f ".deps/hash-pjw.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT addext.o -MD -MP -MF ".deps/addext.Tpo" \
  -c -o addext.o `test -f 'addext.c' || echo './'`addext.c; \
then mv ".deps/addext.Tpo" ".deps/addext.Po"; \
else rm -f ".deps/addext.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT argmatch.o -MD -MP -MF ".deps/argmatch.Tpo" \
  -c -o argmatch.o `test -f 'argmatch.c' || echo './'`argmatch.c; \
then mv ".deps/argmatch.Tpo" ".deps/argmatch.Po"; \
else rm -f ".deps/argmatch.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT backupfile.o -MD -MP -MF ".deps/backupfile.Tpo" \
  -c -o backupfile.o `test -f 'backupfile.c' || echo './'`backupfile.c; \
then mv ".deps/backupfile.Tpo" ".deps/backupfile.Po"; \
else rm -f ".deps/backupfile.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT basename.o -MD -MP -MF ".deps/basename.Tpo" \
  -c -o basename.o `test -f 'basename.c' || echo './'`basename.c; \
then mv ".deps/basename.Tpo" ".deps/basename.Po"; \
else rm -f ".deps/basename.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT canon-host.o -MD -MP -MF ".deps/canon-host.Tpo" \
  -c -o canon-host.o `test -f 'canon-host.c' || echo './'`canon-host.c; \
then mv ".deps/canon-host.Tpo" ".deps/canon-host.Po"; \
else rm -f ".deps/canon-host.Tpo"; exit 1; \
fi
if gcc -DLIBDIR=\"/home/peter/result/lib\" -DHAVE_CONFIG_H -I. -I. -I.. -I.. -I.    -g -O2 -MT closeout.o -MD -MP -MF ".deps/closeout.Tpo" \
  -c -o closeout.o `test -f 'closeout.c' || echo './'`closeout.c; \
then mv ".deps/closeout.Tpo" ".deps/closeout.Po"; \
else rm -f ".deps/closeout.Tpo"; exit 1; \
fi
In file included from /usr/include/fortify/stdlib.h:33,
                 from posixver.c:28:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
   75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
      | ^~~~~~~~~~~
In file included from posixver.c:34:
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
   81 |         return __orig_getgroups(__l, __s);
      |                ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
   75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
      | ^~~~~~~~~~~
In file included from /usr/include/fortify/unistd.h:26,
                 from canon-host.c:27:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
   75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
      | ^~~~~~~~~~~
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
   81 |         return __orig_getgroups(__l, __s);
      |                ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
   75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
      | ^~~~~~~~~~~
In file included from /usr/include/fortify/strings.h:23,
                 from /usr/include/string.h:59,
                 from /usr/include/fortify/string.h:23,
                 from addext.c:41:
/usr/include/fortify/unistd.h:75:1: error: 'getgroups' undeclared here (not in a function); did you mean 'setgroups'?
   75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
      | ^~~~~~~~~~~
In file included from addext.c:47:
/usr/include/fortify/unistd.h: In function 'getgroups':
/usr/include/fortify/unistd.h:81:16: error: called object '__orig_getgroups' is not a function or function pointer
   81 |         return __orig_getgroups(__l, __s);
      |                ^~~~~~~~~~~~~~~~
/usr/include/fortify/unistd.h:75:1: note: declared here
   75 | _FORTIFY_FN(getgroups) int getgroups(int __l, gid_t * _FORTIFY_POS0 __s)
      | ^~~~~~~~~~~
make[1]: *** [Makefile:590: posixver.o] Error 1
make[1]: *** Waiting for unfinished jobs....
make[1]: *** [Makefile:590: addext.o] Error 1
make[1]: *** [Makefile:590: canon-host.o] Error 1
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
make: *** [Makefile:244: install-recursive] Error 1
↓ 89 lines
ASSISTANT
Show reasoning

We need to compile coreutils 5.0 on Alpine. Issues: duplicate ino_t definition and also getgroups errors due to fortify header causing macro issues. We might need to disable fortify or use -D__FORTIFY_SOURCE=0 perhaps. Simpler: add -Dgetgroups=getgroups to avoid macro? But better to disable fortify includes by adding -U_FORTIFY_SOURCE maybe? Actually errors arise from fortify headers expecting getgroups to be available; maybe we need to link with glibc? On Alpine, musl's unistd.h may not declare getgroups? Indeed musl's getgroups defined? Let's check.

compile-bench> grep -R "getgroups" -n /usr/include/unistd.h | head
116:int getgroups(int, gid_t []);
ASSISTANT
Show reasoning

We need to fix compile errors due to fortify headers redefining getgroups. Perhaps need to define _FORTIFY_SOURCE=0 or disable fortify. In configure we can add CFLAGS to avoid fortify. Simpler: add -U_FORTIFY_SOURCE to CFLAGS. Export CFLAGS before make. Let's try reconfigure with CFLAGS="-U_FORTIFY_SOURCE". Also need to re-run configure after cleaning.

We'll clean, then configure with CFLAGS.

compile-bench> cd coreutils-5.0 && make distclean
Making distclean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making distclean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making distclean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making distclean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making distclean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making distclean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.
[command output truncated]
m -f Makefile 
make[1]: Leaving directory '/home/peter/coreutils-5.0/man'
Making distclean in doc
make[1]: Entering directory '/home/peter/coreutils-5.0/doc'
rm -f coreutils.aux coreutils.cp coreutils.cps coreutils.fl coreutils.fn \
  coreutils.ky coreutils.log coreutils.op coreutils.pg \
  coreutils.tmp coreutils.toc coreutils.tp coreutils.tps \
  coreutils.vr coreutils.dvi coreutils.pdf coreutils.ps
rm -f vti.tmp
rm -f Makefile 
make[1]: Leaving directory '/home/peter/coreutils-5.0/doc'
Making distclean in src
make[1]: Entering directory '/home/peter/coreutils-5.0/src'
test -z "chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who " || rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who  > /dev/null 2>&1 || /bin/rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who 
test -z "groups  nohup su" || rm -f groups  nohup su
rm -f *.o core *.core
rm -f *.tab.c
rm -rf ./.deps
rm -f Makefile 
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[1]: Leaving directory '/home/peter/coreutils-5.0/src'
Making distclean in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
test -z "charset.alias ref-add.sed ref-del.sed" || rm -f charset.alias ref-add.sed ref-del.sed
test -z "libfetish.a" || rm -f libfetish.a
rm -f *.o core *.core
rm -f *.tab.c
rm -rf .deps ./.deps
rm -f Makefile 
test -z "ftw.h search.h fnmatch.h" || rm -f ftw.h search.h fnmatch.h
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
Making distclean in .
make[1]: Entering directory '/home/peter/coreutils-5.0'
rm -f Makefile 
rm -f config.h stamp-h1
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[1]: Leaving directory '/home/peter/coreutils-5.0'
rm -f config.status config.cache config.log configure.lineno
↓ 64 lines
ASSISTANT
Show reasoning

We need to compile coreutils 5.0 and install to /home/peter/result. The build fails due to getgroups macro redefinition in fortify headers. Might need to disable fortify or define appropriate macros. Possibly we need to add -U_FORTIFY_SOURCE or include -D_GNU_SOURCE? Let's check config.h maybe has FORTIFY. The issue: fortify headers replace getgroups with macro, causing errors because the function is not declared (maybe due to missing #define _POSIX_SOURCE?). In coreutils, they may rely on getgroups function. The error suggests that includes fortify/unistd.h which redefines getgroups macro but actual function prototype missing due to maybe missing __USE_POSIX? We can try to add -D_FORTIFY_SOURCE=0 or disable fortify by setting CFLAGS. Could also add -I/usr/include -D_GNU_SOURCE? Let's inspect /usr/include/unistd.h includes getgroups prototype normally. In Alpine, maybe getgroups is under POSIX. The macro from fortify expects original __orig_getgroups to exist, which is defined via __builtin or wrapper.

Simpler: configure with --disable-nls already. But need to pass something like CFLAGS="-U_FORTIFY_SOURCE". Let's try reinstall with CFLAGS env. Also the earlier duplicate ino_t fixed. Let's reconfigure with CFLAGS="-U_FORTIFY_SOURCE".

We will clean, reconfigure, make install.

compile-bench> cd coreutils-5.0 && ./configure --disable-nls --prefix=/home/peter/result CFLAGS="-U_FORTIFY_SOURCE"
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
         a usable version of the Perl File::Compare module.  As a result,
         you may be unable to run a few tests or to regenerate certain
         files if you modify the sources from which they are derived.
 
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking whether gcc needs -traditional... no
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for AIX... no
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking for uname... yes
checking for chroot... yes
checking for gethostid... yes
checking for strerror in -lcposix... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGE_FILES value needed for large files... no
checking for gcc option to accept ANSI C... none needed
checking for function prototypes... yes
checking for ANSI C header files... (cached) no
checking for string.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for inline... inline
checking for working long double with more range or precision than double... no
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
[command output truncated]
checking shadow.h presence... yes
checking for shadow.h... yes
checking for struct spwd.sp_pwdp... yes
checking for getspnam... yes
checking for library containing crypt... none required
checking for msgfmt... no
checking for gmsgfmt... :
checking for xgettext... no
checking for msgmerge... no
checking whether NLS is requested... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating lib/Makefile
config.status: creating man/Makefile
config.status: creating m4/Makefile
config.status: creating po/Makefile.in
config.status: creating src/Makefile
config.status: creating tests/Makefile
config.status: creating tests/basename/Makefile
config.status: creating tests/chgrp/Makefile
config.status: creating tests/chmod/Makefile
config.status: creating tests/chown/Makefile
config.status: creating tests/cp/Makefile
config.status: creating tests/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
↓ 141 lines
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result. Issues: previous compilation failed due to duplicate ino_t definition and fortify errors. We attempted to disable fortify by -U_FORTIFY_SOURCE but not enough. The error came from fortify wrapper defining getgroups macro leading to conflict. Perhaps need to disable fortify entirely. Could set CFLAGS="-D_FORTIFY_SOURCE=0 -U_FORTIFY_SOURCE". Or use CPPFLAGS="-U_FORTIFY_SOURCE". Or configure with --disable-nls already. Could also add --disable-libc-printf? Not.

Simpler: Since coreutils 5.0 is old, maybe the system's fortify headers cause issues. We can disable fortify includes by defining __USE_FORTIFY_LEVEL=0? The header includes fortify.h which redefines getgroups. Perhaps define __FORTIFY_LEVEL=0. Maybe easiest: add CFLAGS="-U_FORTIFY_SOURCE -D_FORTIFY_SOURCE=0". Also add CPPFLAGS="-U_FORTIFY_SOURCE". Let's reconfigure with those.

We need to clean, reconfigure, compile, install.

Steps:

1. Ensure result dir exists (already).
2. Run make distclean (already done): we did it.
3. Run ./configure with prefix and CFLAGS and CPPFLAGS to suppress fortify.
Let's run configure again.

compile-bench> cd coreutils-5.0 && ./configure --disable-nls --prefix=/home/peter/result CFLAGS='-U_FORTIFY_SOURCE -D_FORTIFY_SOURCE=0' CPPFLAGS='-U_FORTIFY_SOURCE'
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether make sets $(MAKE)... yes
checking for perl5.003 or newer... no
configure: WARNING:
WARNING: You don't seem to have perl5.003 or newer installed, or you lack
         a usable version of the Perl File::Compare module.  As a result,
         you may be unable to run a few tests or to regenerate certain
         files if you modify the sources from which they are derived.
 
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking whether gcc needs -traditional... no
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for AIX... no
checking for ANSI C header files... no
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking for uname... yes
checking for chroot... yes
checking for gethostid... yes
checking for strerror in -lcposix... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGE_FILES value needed for large files... no
checking for gcc option to accept ANSI C... none needed
checking for function prototypes... yes
checking for ANSI C header files... (cached) no
checking for string.h... (cached) yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for working volatile... yes
checking for inline... inline
checking for working long double with more range or precision than double... no
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking float.h usability... yes
checking float.h presence... yes
[command output truncated]
checking for shadow.h... yes
checking for struct spwd.sp_pwdp... yes
checking for getspnam... yes
checking for library containing crypt... none required
checking for msgfmt... no
checking for gmsgfmt... :
checking for xgettext... no
checking for msgmerge... no
checking whether NLS is requested... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating lib/Makefile
config.status: creating man/Makefile
config.status: creating m4/Makefile
config.status: creating po/Makefile.in
config.status: creating src/Makefile
config.status: creating tests/Makefile
config.status: creating tests/basename/Makefile
config.status: creating tests/chgrp/Makefile
config.status: creating tests/chmod/Makefile
config.status: creating tests/chown/Makefile
config.status: creating tests/cp/Makefile
config.status: creating tests/cut/Makefile
config.status: creating tests/date/Makefile
config.status: creating tests/dd/Makefile
config.status: creating tests/dircolors/Makefile
config.status: creating tests/du/Makefile
config.status: creating tests/expr/Makefile
config.status: creating tests/factor/Makefile
config.status: creating tests/fmt/Makefile
config.status: creating tests/head/Makefile
config.status: creating tests/install/Makefile
config.status: creating tests/join/Makefile
config.status: creating tests/ln/Makefile
config.status: creating tests/ls-2/Makefile
config.status: creating tests/ls/Makefile
config.status: creating tests/md5sum/Makefile
config.status: creating tests/misc/Makefile
config.status: creating tests/mkdir/Makefile
config.status: creating tests/mv/Makefile
config.status: creating tests/od/Makefile
config.status: creating tests/pr/Makefile
config.status: creating tests/rm/Makefile
config.status: creating tests/rmdir/Makefile
config.status: creating tests/seq/Makefile
config.status: creating tests/sha1sum/Makefile
config.status: creating tests/shred/Makefile
config.status: creating tests/sort/Makefile
config.status: creating tests/stty/Makefile
config.status: creating tests/sum/Makefile
config.status: creating tests/tac/Makefile
config.status: creating tests/tail-2/Makefile
config.status: creating tests/tail/Makefile
config.status: creating tests/test/Makefile
config.status: creating tests/touch/Makefile
config.status: creating tests/tr/Makefile
config.status: creating tests/tsort/Makefile
config.status: creating tests/unexpand/Makefile
config.status: creating tests/uniq/Makefile
config.status: creating tests/wc/Makefile
config.status: creating config.h
config.status: config.h is unchanged
config.status: linking ./lib/fnmatch_.h to lib/fnmatch.h
config.status: linking ./lib/ftw_.h to lib/ftw.h
config.status: executing depfiles commands
config.status: executing default-1 commands
config.status: creating po/POTFILES
config.status: creating po/Makefile
↓ 141 lines
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory.

We have issues with fortify source causing errors. We attempted to disable fortify via CFLAGS -U_FORTIFY_SOURCE etc. The errors were from fortify header interfering with getgroups. We might need to define _FORTIFY_SOURCE=0 or disable fortify entirely. Perhaps adding -D_FORTIFY_SOURCE=0 -U_FORTIFY_SOURCE.

We already reconfigured with those flags. Now need to make and install.

Let's run make and install again.

compile-bench> cd coreutils-5.0 && make -j$(nproc) > /dev/null 2>&1 && echo build_done
[empty output]
ASSISTANT
Show reasoning

We have now built the coreutils with patched config.h (commented out ino_t) and disabled fortify source. Build succeeded (no error). However we haven't installed yet. Need to run make install to /home/peter/result. Then create symlinks for all utilities under /home/peter/result/ pointing to the compiled binary.

We must locate compiled binaries: they are installed into prefix bin directory: /home/peter/result/bin likely. Let's check existence.

compile-bench> ls /home/peter/result/bin
ls: /home/peter/result/bin: No such file or directory
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result. The earlier attempts failed due to getgroups errors from fortify headers. We attempted to disable fortify by -U_FORTIFY_SOURCE but still errors. Perhaps need to add -D_FORTIFY_SOURCE=0 and also define getgroups prototype? Another approach: use --disable-largefile? Not.

Maybe easier: use make install DESTDIR? But still compile errors.

We could avoid building lib part that includes getgroups? The errors are in lib files posixver.c, addext.c, canon-host.c. Could patch to include before fortify? Actually fortify header redefines getgroups macro causing conflict. Maybe need to define _FORTIFY_SOURCE=0 before including fortify. Already attempted.

But the error is that fortify header defines getgroups as macro, but the source expects function prototype. The macro expands causing syntax error. Setting -U_FORTIFY_SOURCE should prevent inclusion of fortify headers? In glibc, fortify is enabled when _FORTIFY_SOURCE is defined and __OPTIMIZE__ is defined. By default, gcc defines __OPTIMIZE__ when -O2. The macro _FORTIFY_SOURCE is defined by default to 2 in glibc if optimization. So we need to undefine it. Using -U_FORTIFY_SOURCE should work. But maybe the header still defines getgroups macro regardless? Actually fortify defines wrappers only if _FORTIFY_SOURCE > 0. So undef should stop. However the error still appears, meaning the macro still defined. Perhaps the compile includes which includes which includes fortify.h which defines getgroups macro based on __USE_FORTIFY_LEVEL. That macro is defined if _FORTIFY_SOURCE is defined and __OPTIMIZE__.

Maybe we need to compile with -O0 to avoid fortify. Use CFLAGS="-O0 -U_FORTIFY_SOURCE". Let's try.

compile-bench> cd coreutils-5.0 && make distclean
Making distclean in tests
make[1]: Entering directory '/home/peter/coreutils-5.0/tests'
Making distclean in wc
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/wc'
test -z "a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E" || rm -f a0.O a0.E a1.O a1.E a2.O a2.E a3.O a3.E a4.O a4.E a5.O a5.E a6.O a6.E a7.O a7.E a8.O a8.E a9.O a9.E b0.O b0.E b1.O b1.E c0.O c0.E c1.O c1.E c2.O c2.E
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/wc'
Making distclean in uniq
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/uniq'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E" || rm -f 1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E 10.O 10.E 11.O 11.E 12.O 12.E 13.O 13.E 20.O 20.E 21.O 21.E 22.O 22.E 23.O 23.E obs30.O obs30.E 31.O 31.E 32.O 32.E 33.O 33.E 34.O 34.E 35.O 35.E obs40.O obs40.E obs41.O obs41.E 42.O 42.E 43.O 43.E obs44.O obs44.E obs45.O obs45.E 50.O 50.E 51.O 51.E 52.O 52.E 53.O 53.E 54.O 54.E 55.O 55.E 56.O 56.E 57.O 57.E 60.O 60.E 61.O 61.E 62.O 62.E 63.O 63.E 64.O 64.E 65.O 65.E 90.O 90.E 91.O 91.E 92.O 92.E 93.O 93.E 94.O 94.E 101.O 101.E 102.O 102.E 110.O 110.E 111.O 111.E 112.O 112.E 113.O 113.E 114.O 114.E 115.O 115.E 116.O 116.E 117.O 117.E 118.O 118.E 119.O 119.E
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/uniq'
Making distclean in unexpand
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/unexpand'
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/unexpand'
Making distclean in tsort
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tsort'
rm -f Makefile 
make[2]: Leaving directory '/home/peter/coreutils-5.0/tests/tsort'
Making distclean in tr
make[2]: Entering directory '/home/peter/coreutils-5.0/tests/tr'
test -z "1.O 1.E 2.O 2.E 3.O 3.E 4.O 4.E 5.O 5.E 6.O 6.E 7.O 7.E 8.O 8.E 9.O 9.E a.O a.E b.O b.E c.O c.E d.O d.E e.O e.E f.O f.E g.O g.E h.O h.E i.O i.E j.O j.E k.O k.E l.O l.E m.O m.E n.O n.E o.O o.E p.O p.E q.O q.E r.O r.E s.O s.E t.O t.E u.O u.E v.O v.E w.O w.E x.O x.E y.O y.E z.O z.E range-a-a.O range-a-a.E null.O null.E upcase.O upcase.E dncase.O dncase.E rep-cclass.O rep-cclass.E rep-1.O rep-1.E rep-2.O rep-2.E rep-3.O rep-3.E o-rep-1.O o-rep-1.E o-rep-2.O o-rep-2.E esc.O esc.
[command output truncated]
 '/home/peter/coreutils-5.0/man'
Making distclean in doc
make[1]: Entering directory '/home/peter/coreutils-5.0/doc'
rm -f coreutils.aux coreutils.cp coreutils.cps coreutils.fl coreutils.fn \
  coreutils.ky coreutils.log coreutils.op coreutils.pg \
  coreutils.tmp coreutils.toc coreutils.tp coreutils.tps \
  coreutils.vr coreutils.dvi coreutils.pdf coreutils.ps
rm -f vti.tmp
rm -f Makefile 
make[1]: Leaving directory '/home/peter/coreutils-5.0/doc'
Making distclean in src
make[1]: Entering directory '/home/peter/coreutils-5.0/src'
test -z "chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who uptime stty df" || rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who uptime stty df > /dev/null 2>&1 || /bin/rm -f chgrp chown chmod cp dd dircolors du ginstall link ln dir vdir ls mkdir mkfifo mknod mv readlink rm rmdir shred stat sync touch unlink cat cksum comm csplit cut expand fmt fold head join md5sum nl od paste pr ptx sha1sum sort split sum tac tail tr tsort unexpand uniq wc basename date dirname echo env expr factor false hostname id kill logname pathchk printenv printf pwd seq sleep tee test true tty whoami yes  uname chroot hostid nice pinky users who uptime stty df
test -z "groups  nohup su" || rm -f groups  nohup su
rm -f *.o core *.core
rm -f *.tab.c
rm -rf ./.deps
rm -f Makefile 
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[1]: Leaving directory '/home/peter/coreutils-5.0/src'
Making distclean in lib
make[1]: Entering directory '/home/peter/coreutils-5.0/lib'
test -z "charset.alias ref-add.sed ref-del.sed" || rm -f charset.alias ref-add.sed ref-del.sed
test -z "libfetish.a" || rm -f libfetish.a
rm -f *.o core *.core
rm -f *.tab.c
rm -rf .deps ./.deps
rm -f Makefile 
test -z "ftw.h search.h fnmatch.h" || rm -f ftw.h search.h fnmatch.h
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[1]: Leaving directory '/home/peter/coreutils-5.0/lib'
Making distclean in .
make[1]: Entering directory '/home/peter/coreutils-5.0'
rm -f Makefile 
rm -f config.h stamp-h1
rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
make[1]: Leaving directory '/home/peter/coreutils-5.0'
rm -f config.status config.cache config.log configure.lineno
↓ 63 lines
ASSISTANT
Show reasoning

We need to compile coreutils v5.0 on Alpine. The earlier attempts failed due to duplicate ino_t definition and fortify source errors. We attempted to comment out ino_t definition, but still got fortify errors. The fortify errors are due to _FORTIFY_SOURCE macros causing redefinition of getgroups. We can disable fortify by adding -U_FORTIFY_SOURCE and maybe -D_FORTIFY_SOURCE=0. Already attempted but still errors? The errors persisted earlier because we didn't reconfigure after editing config.h? Actually we edited config.h earlier to comment out ino_t. Then we reconfigured with CFLAGS -U_FORTIFY_SOURCE etc. But still errors? The errors were from earlier install attempt before reconfigure. After reconfigure and make, we didn't see errors; we just built successfully (no output). Let's verify that binaries exist in result. The prefix is /home/peter/result. After make, we haven't run make install yet. Let's run make install now.

compile-bench> cd coreutils-5.0 && make install -j$(nproc) > /dev/null 2>&1 && echo installed
[empty output]
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility under that directory (i.e., /home/peter/result/ pointing to the binary). The build earlier had issues with fortify. We attempted to disable fortify via CFLAGS, but still maybe not compiled? The install command succeeded (no output). Let's check result directory.

compile-bench> ls -R /home/peter/result | head -n 20
/home/peter/result:
ASSISTANT
Show reasoning

The install didn't create any files. Possibly because make install didn't run due to missing bin directory? Let's check make install output earlier; it attempted to compile lib but failed earlier due to getgroups. We attempted to disable fortify but still maybe other issues. Let's see if configure succeeded earlier. It succeeded. Build succeeded earlier? We built with make -j... but maybe still errors suppressed? Let's check if any binaries exist in coreutils-5.0/src after build.

compile-bench> ls coreutils-5.0/src | wc -l
113
ASSISTANT
Show reasoning

We need to compile coreutils and install to /home/peter/result, then create symlinks for each utility binary under that directory. The earlier attempts failed due to getgroups errors from fortify. We attempted to disable fortify via CFLAGS -U_FORTIFY_SOURCE but still errors. Perhaps we need to add -D_FORTIFY_SOURCE=0 and also -fno-stack-protector? Or maybe the issue is that the system's headers define getgroups as a macro with fortify, causing conflict. Could disable fortify by adding -D_FORTIFY_SOURCE=0 and also -U_FORTIFY_SOURCE. Already attempted. Still errors. Maybe need to add -D_GNU_SOURCE? Or include -D_POSIX_SOURCE? Actually the error arises because fortify header defines getgroups as a macro that expands to something expecting a function pointer __orig_getgroups, but coreutils defines its own getgroups function? Let's search for getgroups in source.{
"command": "grep -R \"getgroups\" -n coreutils-5.0 | head"
}

Task failed!
Error
task failed: sha1sum binary does not exist
Checks failed:
sha1sum binary does not exist
basename missing at /home/peter/result/basename or not executable
cat missing at /home/peter/result/cat or not executable
chgrp missing at /home/peter/result/chgrp or not executable
chmod missing at /home/peter/result/chmod or not executable
chown missing at /home/peter/result/chown or not executable
chroot missing at /home/peter/result/chroot or not executable
cksum missing at /home/peter/result/cksum or not executable
comm missing at /home/peter/result/comm or not executable
cp missing at /home/peter/result/cp or not executable
csplit missing at /home/peter/result/csplit or not executable
cut missing at /home/peter/result/cut or not executable
date missing at /home/peter/result/date or not executable
dd missing at /home/peter/result/dd or not executable
df missing at /home/peter/result/df or not executable
dir missing at /home/peter/result/dir or not executable
dircolors missing at /home/peter/result/dircolors or not executable
dirname missing at /home/peter/result/dirname or not executable
du missing at /home/peter/result/du or not executable
echo missing at /home/peter/result/echo or not executable
env missing at /home/peter/result/env or not executable
expand missing at /home/peter/result/expand or not executable
expr missing at /home/peter/result/expr or not executable
factor missing at /home/peter/result/factor or not executable
false missing at /home/peter/result/false or not executable
fmt missing at /home/peter/result/fmt or not executable
fold missing at /home/peter/result/fold or not executable
groups missing at /home/peter/result/groups or not executable
head missing at /home/peter/result/head or not executable
hostid missing at /home/peter/result/hostid or not executable
id missing at /home/peter/result/id or not executable
install missing at /home/peter/result/install or not executable
join missing at /home/peter/result/join or not executable
kill missing at /home/peter/result/kill or not executable
link missing at /home/peter/result/link or not executable
ln missing at /home/peter/result/ln or not executable
logname missing at /home/peter/result/logname or not executable
ls missing at /home/peter/result/ls or not executable
md5sum missing at /home/peter/result/md5sum or not executable
mkdir missing at /home/peter/result/mkdir or not executable
mkfifo missing at /home/peter/result/mkfifo or not executable
mknod missing at /home/p
pathchk missing at /home/peter/result/pathchk or not executable
pinky missing at /home/peter/result/pinky or not executable
pr missing at /home/peter/result/pr or not executable
printenv missing at /home/peter/result/printenv or not executable
printf missing at /home/peter/result/printf or not executable
ptx missing at /home/peter/result/ptx or not executable
pwd missing at /home/peter/result/pwd or not executable
readlink missing at /home/peter/result/readlink or not executable
rm missing at /home/peter/result/rm or not executable
rmdir missing at /home/peter/result/rmdir or not executable
seq missing at /home/peter/result/seq or not executable
sha1sum missing at /home/peter/result/sha1sum or not executable
shred missing at /home/peter/result/shred or not executable
sleep missing at /home/peter/result/sleep or not executable
sort missing at /home/peter/result/sort or not executable
split missing at /home/peter/result/split or not executable
stat missing at /home/peter/result/stat or not executable
stty missing at /home/peter/result/stty or not executable
sum missing at /home/peter/result/sum or not executable
sync missing at /home/peter/result/sync or not executable
tac missing at /home/peter/result/tac or not executable
tail missing at /home/peter/result/tail or not executable
tee missing at /home/peter/result/tee or not executable
test missing at /home/peter/result/test or not executable
touch missing at /home/peter/result/touch or not executable
tr missing at /home/peter/result/tr or not executable
true missing at /home/peter/result/true or not executable
tsort missing at /home/peter/result/tsort or not executable
tty missing at /home/peter/result/tty or not executable
uname missing at /home/peter/result/uname or not executable
unexpand missing at /home/peter/result/unexpand or not executable
uniq missing at /home/peter/result/uniq or not executable
unlink missing at /home/peter/result/unlink or not executable
uptime missing at /home/peter/result/uptime or not executable
users missing at /home/peter/result/users or not executable
vdir missing at /home/peter/result/vdir or not executable
wc missing at /home/peter/result/wc or not executable
who missing at /home/peter/result/who or not executable
whoami missing at /home/peter/result/whoami or not executable
yes missing at /home/peter/result/yes or not executable
sha1sum version mismatch: expected 5.0 got
sha1sum output mismatch: expected 648a6a6ffffdaa0badb23b8baf90b6168dd16b3a got